Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Ep300

Cell type

Cell type Class
Neural
Cell type
Cerebellar Cortex
MeSH Description
The superficial GRAY MATTER of the CEREBELLUM. It consists of two main layers, the stratum moleculare and the stratum granulosum.

Attributes by original data submitter

Sample

source_name
mouse postnatal (P0) cortex
strain
129/C57BL/6
tissue
mouse cortex
developmental stage
P0
chip antibody
2)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
86309867
Reads aligned (%)
88.8
Duplicates removed (%)
63.1
Number of peaks
2161 (qval < 1E-05)

mm9

Number of total reads
86309867
Reads aligned (%)
88.2
Duplicates removed (%)
63.0
Number of peaks
2284 (qval < 1E-05)

Base call quality data from DBCLS SRA